From: Winnipeg, MB
ORIGINAL: Ian R
You can either add to the squadrons themselves, if necessary increasing the size of the squadrons. There are links for that if you look for them. To add more squadrons, you have to go to the squadron itself and selecting to load onto a ship in range, then select the ship that you want them loaded onto. If you look at the picture posted above, there is a selection for "Transfer to ship."
But you need to repair that ship, it may not operate aircraft very effectively if at all due to the total amount of damage and in fact, it may even submerge if attacked again.
And, as soon as the Indomitable is stood down, she'll upgrade - but its a small one 15 day delay for more AAA so may as well get it done.
With that kind of damage she will probably be in the shipyard for the rest of her current time on map. Don't worry about adding aircraft - you are wasting them because they can't fly on or off the carrier. Also, I ran out of Albacores and Fulmars for my British carriers so increasing squadron size may not help for those planes. I would remove the aircraft in port and sent the carrier to Cape Town for repair and withdrawal.
No matter how bad a situation is, you can always make it worse. - Chris Hadfield : An Astronaut's Guide To Life On Earth